Package index • PTMsToPathways

All functions

BuildClusterFilteredNetwork(): Build PPI Network
BuildPathwayCrosstalkNetwork(): Build Pathway Crosstalk Network
GetGeneMANIA.edges(): Get GeneMANIA Edges
GetKinsub.edges(): Format Kinsub Table
GetSTRINGdb.edges(): Get STRINGdb PPI data
MakeClusterList(): Build Clusters Based on PTM Data Under Like Conditions
MakeCorrelationNetwork(): Make Correlation Network
MakeDBInput(): Make Database Input File
ex_pathways_list: Pathways list
getFuncKey(): Graphing and Manipulating Cluster Filtered Network
`%w/o%`: Set difference for vectors using custom infix operator
make.genepep.edges(): Title
ptms_to_cfn(): Extracts co-clustered PTM and gene network from a cluster filtered network object.
remove.autophos(): Title
setCorrEdgeAppearance(): Title